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Genomic insights into ecological adaptation of oaks revealed by phylogenomic analysis of multiple species 期刊论文
PLANT DIVERSITY, 2025, 卷号: 47, 期号: 1, 页码: 53-67
Authors:  Wang, Tian-Rui;  Ning, Xin;  Zheng, Si-Si;  Li, Yu;  Lu, Zi-Jia;  Meng, Hong-Hu;  Ge, Bin-Jie;  Kozlowski, Gregor;  Yan, Meng-Xiao;  Song, Yi-Gang
Adobe PDF(4358Kb)  |  Favorite  |  View/Download：175/95  |  Submit date：2025/03/10
Quercus  Ecological adaptation  Phylogenomics  Transcriptomes  Fagaceae  
Similar in appearance but distinct in nature: Recent divergence of Salvia honania and S. meiliensis 期刊论文
TAXON, 2025, 期号: x, 页码: -
Authors:  Yan, Rong-Rong;  Wang, Mei;  Meng, Hong-Hu;  Drew, Bryan T.;  Celep, Ferhat;  Xiang, Chun-Lei;  Hu, Guo-Xiong
Adobe PDF(3200Kb)  |  Favorite  |  View/Download：87/24  |  Submit date：2025/11/12
bottleneck event  cryptic species  gene flow  incomplete lineage sorting  integrative taxonomy  Lamiaceae  Salvia sect. Drymosphace  
Genome analyses provide insights into Engelhardia's adaptation to East Asia summer monsoon 期刊论文
PLANT DIVERSITY, 2025, 卷号: 47, 期号: 5, 页码: 718-732
Authors:  Li, Min;  Wu, Jing-Jing;  Su, Ren-Ping;  Fang, Ou-Yan;  Cai, Xiang;  Huang, Pei-Han;  Gao, Xiao-Yang;  Fu, Xin-Xing;  Ma, Xiao-Hui;  He, Lin-Yue;  Song, Yi-Gang;  Hu, Guo-Xiong;  Zhou, Shi-Shun;  Tan, Yun-Hong;  van de Peer, Yves;  Li, Jie;  Wu, Sheng-Dan;  Meng, Hong-Hu
Adobe PDF(12004Kb)  |  Favorite  |  View/Download：24/3  |  Submit date：2025/11/12
Engelhardia  Comparative genomics  Genome evolution  EBLFs  TPS  EASM  
RAD-seq reveals Cenozoic shifts in the palaeogeographic distribution of Trigonobalanus verticillata across the Indochina Peninsula and Malay Archipelago 期刊论文
PALAEOGEOGRAPHY PALAEOCLIMATOLOGY PALAEOECOLOGY, 2025, 卷号: 679, 期号: x, 页码: -
Authors:  Hu, Ling;  Huang, Pei-Han;  Song, Yi-Gang;  Low, Shook Ling;  Hu, Guo-Xiong;  Zhou, Shi-Shun;  Li, Lang;  Tan, Yun-Hong;  Meng, Hong-Hu;  Cun, Yu-Peng;  Li, Jie
Adobe PDF(8522Kb)  |  Favorite  |  View/Download：48/23  |  Submit date：2025/11/12
Paleogeography  Climate refugia  Trigonobalanus verticillata  Malay Archipelago  Indochina Peninsula  
Evolution of East Asian subtropical evergreen broad-leaved forests: When and how? 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2025, 卷号: 63, 期号: 5, 页码: 1045-1060
Authors:  Meng, Hong-Hu;  Song, Yi-Gang;  Hu, Guo-Xiong;  Huang, Pei-Han;  Li, Min;  Fang, Ou-Yan;  Su, Ren-Ping;  Cao, Guan-Long;  Cai, Xiang;  Zhou, Shi-Shun;  Tan, Yun-Hong;  Xiang, Xiao-Guo;  Wang, Wei;  Zhou, Zhe-Kun;  Li, Jie
Adobe PDF(1461Kb)  |  Favorite  |  View/Download：38/25  |  Submit date：2025/11/12
biodiversity conservation  Cenozoic  East Asian monsoon  evergreen broad-leaved forests  evolution  geographic distribution  
The reconstructed evolutionary history of the Engelhardia spicata complex highlights the impact of a three-tiered landform in the Indo-Burma ecoregion 期刊论文
AMERICAN JOURNAL OF BOTANY, 2025, 卷号: 112, 期号: 8, 页码: -
Authors:  Zhang, Can-Yu;  Cao, Guan-Long;  Hu, Jian-Lin;  Huang, Pei-Han;  Li, Min;  Su, Ren-Ping;  Fang, Ou-Yan;  Cai, Xiang;  Song, Yi-Gang;  Hu, Guo-Xiong;  Xie, Kai-Qing;  Li, Lang;  Zhou, Shi-Shun;  Tan, Yun-Hong;  Meng, Hong-Hu;  Li, Jie
Adobe PDF(6106Kb)  |  Favorite  |  View/Download：45/21  |  Submit date：2025/11/12
biogeographic patterns  Engelhardia spicata complex  Indo-Burma ecoregion  Juglandaceae  spatiotemporal history  three-tiered landform  
Different reference genomes determine different results: Comparing SNP calling in RAD-seq of Engelhardia roxburghiana using different reference genomes 期刊论文
PLANT SCIENCE, 2024, 卷号: 344, 期号: _, 页码: _
Authors:  Huang, Pei -Han;  Wang, Tian-Rui;  Li, Min;  Fang, Ou-Yan;  Su, Ren-Ping;  Meng, Hong-Hu;  Song, Yi-Gang;  Li, Jie
Adobe PDF(1531Kb)  |  Favorite  |  View/Download：122/60  |  Submit date：2024/07/22
RAD-seq  STACKS  SNP calling  Reference-based approach  
Plastome evolution of Engelhardia facilitates phylogeny of Juglandaceae 期刊论文
BMC PLANT BIOLOGY, 2024, 卷号: 24, 期号: 1, 页码: _
Authors:  Huang, Yue;  Jin, Xin-Jie;  Zhang, Can-Yu;  Li, Pan;  Meng, Hong-Hu;  Zhang, Yong-Hua
Adobe PDF(8926Kb)  |  Favorite  |  View/Download：68/25  |  Submit date：2024/07/22
Engelhardia  Plastomes  Phylogenetic relationships  Insertion and deletion  Codon usage pattern  
Dense infraspecific sampling reveals cryptic differentiation in the enigmatic hemiparasitic love vine Cassytha filiformis (Lauraceae) 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2024, 期号: x, 页码: -
Authors:  Liu, Zhi-Fang;  Zhang, Shi-Fang;  Twyford, Alex D.;  Ci, Xiu-Qin;  Li, Lang;  Zhang, Xiao-Yan;  Hu, Jian-Lin;  Tan, Jia-Chuan;  Tang, Guang-Da;  Qin, Sheng-Yuan;  Hu, Ling;  Ding, Xin;  Meng, Hong-Hu;  Dong, Li-Na;  Huang, Ting;  Ma, Hui;  Xiao, Jian-Hua;  Cai, Chao-Nan;  Conran, John G.;  Wang, Qi;  Hollingsworth, Peter M.;  Li, Jie
Adobe PDF(3277Kb)  |  Favorite  |  View/Download：130/54  |  Submit date：2024/05/09
Cassytha  morphology  parasitic angiosperms  phylogeny  species delimitation  
Alseodaphnopsis maguanensis is conspecific with A. hokouensis (Lauraceae) based on morphological and molecular evidence 期刊论文
PHYTOKEYS, 2024, 期号: 242, 页码: 281_291
Authors:  Li, Lang;  Zou, Dian-yang;  Mao, Ya-meng;  Li, Jie
Adobe PDF(4124Kb)  |  Favorite  |  View/Download：92/41  |  Submit date：2024/07/22
Alseodaphnopsis  Lauraceae  morphology  phylogeny  synonym  taxonomy