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TetraRNA, a tetra-class machine learning model for deciphering the coding potential derivation of RNA world 期刊论文
COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL, 2025, 卷号: 27, 期号: x, 页码: 1305-1317
Authors:  Bai, Hanrui;  Wang, Jie;  Jiang, Xiaoke;  Guo, Zhen;  Yang, Wenjing;  Yang, Zitian;  Li, Jing;  Liu, Changning
Adobe PDF(7282Kb)  |  Favorite  |  View/Download：6/1  |  Submit date：2025/05/21
Translated ncRNA  Untranslated mRNA  CncRNA  Tetra-class classification model  TetraRNADB database  
Multidimensional analysis of long noncoding RNAs function in Solanaceae plants 期刊论文
NEW PHYTOLOGIST, 2025, 卷号: 247, 期号: 3, 页码: 1041-1059
Authors:  Yang, Wenjing;  Bai, Quanzi;  Zhang, Xuan;  Chen, Wen;  Cai, Ankang;  Li, Jing;  Gao, Xiaoyang;  Yao, Baolin;  Liu, Jiazhi;  Li, Yan;  Chen, Jianghua;  Liu, Changning
Adobe PDF(4116Kb)  |  Favorite  |  View/Download：10/5  |  Submit date：2025/07/10
FRUIT-DEVELOPMENT  EXPRESSION  LNCRNAS  TRANSCRIPTOME  ARABIDOPSIS  ANNOTATION  PROFILES  NETWORK  GROWTH  ROLES  
Identification of the toxin components of Rhizoctonia solani AG1-IA and its destructive effect on plant cell membrane structure 期刊论文
FRONTIERS IN PLANT SCIENCE, 2024, 卷号: 15, 页码: -
Authors:  Xu, Shanshan;  Ren, Shaofeng;  Bao, Wenjing;  Li, Xiaoguang;  Zhang, Yumei;  Yu, Buzhu;  Li, Weiqi;  Li, Chengyun;  Dong, Wenhan;  Yang, Genhua
Adobe PDF(3971Kb)  |  Favorite  |  View/Download：7/2  |  Submit date：2024/05/09
R. solani AG1-IA  rice sheath blight  toxin  membrane components  membrane structure  
Epigenetic modifications: Allusive clues of lncRNA functions in plants 期刊论文
COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL, 2023, 卷号: 21, 期号: x, 页码: 1989-1994
Authors:  Yang, Wenjing;  Bai, Quanzi;  Li, Yan;  Chen, Jianghua;  Liu, Changning
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LncRNA  Epigenetic regulation  Epigenomes  Plant  
RNA-Seq analysis reveals the important co-expressed genes associated with polyphyllin biosynthesis during the developmental stages of Paris polyphylla 期刊论文
BMC GENOMICS, 2022, 卷号: 23, 期号: SUPPL 1, 页码: -
Authors:  Gao, Xiaoyang;  Su, Qixuan;  Li, Jing;  Yang, Wenjing;  Yao, Baolin;  Guo, Jiawei;  Li, Shengying;  Liu, Changning
Adobe PDF(7013Kb)  |  Favorite  |  View/Download：5/1  |  Submit date：2022/09/21
Polyphyllin concentration  Spatiotemporal gene expression  Developmental stage  Polyphyllin biosynthesis  Gene co-expression network  
Development of EST-SSR Markers Related to Polyphyllin Biosynthesis Reveals Genetic Diversity and Population Structure in Paris polyphylla 期刊论文
DIVERSITY-BASEL, 2022, 卷号: 14, 期号: 8, 页码: -
Authors:  Gao, Xiaoyang;  Su, Qixuan;  Yao, Baolin;  Yang, Wenjing;  Ma, Weisi;  Yang, Bin;  Liu, Changning
Adobe PDF(2725Kb)  |  Favorite  |  View/Download：6/3  |  Submit date：2022/09/21
Paris polyphylla  transcriptome  polyphyllin  EST-SSR markers  genetic diversity  
PPDP: A Data Portal of Paris polyphylla for Polyphyllin Biosynthesis and Germplasm Resource Exploration 期刊论文
DIVERSITY-BASEL, 2022, 卷号: 14, 期号: 12, 页码: -
Authors:  Su, Qixuan;  Zhang, Xuan;  Li, Jing;  Yang, Wenjing;  Ren, Qiang;  Gao, Xiaoyang;  Liu, Changning
Adobe PDF(3105Kb)  |  Favorite  |  View/Download：5/1  |  Submit date：2023/03/01
Paris polyphylla  polyphyllin  germplasm resource  database  
Data integration and evolutionary analysis of long non-coding RNAs in 25 flowering plants 期刊论文
BMC GENOMICS, 2021, 卷号: 22, 期号: SUPPL 3, 页码: -
Authors:  Sang, Shiye;  Chen, Wen;  Zhang, Di;  Zhang, Xuan;  Yang, Wenjing;  Liu, Changning
Adobe PDF(1593Kb)  |  Favorite  |  View/Download：24/6  |  Submit date：2021/11/25
lncRNAs  Flowering plants  Evolutionary analysis  Conservation  Arabidopsis thaliana  Co-expression network  
Transcriptome analysis of Paris polyphylla var. yunnanensis illuminates the biosynthesis and accumulation of steroidal saponins in rhizomes and leaves 期刊论文
PHYTOCHEMISTRY, 2020, 卷号: 178, 页码: -
Authors:  Gao, Xiaoyang;  Zhang, Xuan;  Chen, Wen;  Li, Jing;  Yang, Wenjing;  Zhang, Xingwang;  Li, Shengying;  Liu, Changning
Adobe PDF(4801Kb)  |  Favorite  |  View/Download：57/0  |  Submit date：2020/10/22
DEFENSE  HERB