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Development of EST-SSR Markers Related to Polyphyllin Biosynthesis Reveals Genetic Diversity and Population Structure in Paris polyphylla
Gao, Xiaoyang; Su, Qixuan1; Yao, Baolin1; Yang, Wenjing2; Ma, Weisi3; Yang, Bin3; Liu, Changning4,5
2022
Source PublicationDIVERSITY-BASEL
ISSN1424-2818
Volume14Issue:8Pages:-
Abstract

Paris polyphylla is an important medicinal plant that can biosynthesize polyphyllins with multiple effective therapies, ranging from anti-inflammation to antitumor; however, the genetic diversity of Paris polyphylla is still unclear. To explore the genetic characteristics of cultivation populations in primary planting areas, we developed 10 expressed sequence tag simple sequence repeat (EST-SSR) markers related to polyphyllin backbone biosynthesis and utilized them in 136 individuals from 10 cultivated populations of P. polyphylla var. yunnanensis. The genetic diversity index showed that ten loci had relatively high genetic polymorphism levels. Shannon information of loci suggested that more information occurred within population and less information occurred among population. In addition, the overall populations exhibited a low degree of differentiation among populations, but maintained a high degree of genetic diversity among individuals, resulting in high gene flow and general hybridization. The genetic structure analysis revealed that 10 populations possibly derived from two ancestral groups and all individuals were found with different levels of admixture. The two groups were different from the cultivation groups at population level, suggesting the cross-pollination among cultivars. These findings will provide insights into the genetic diversity of the germplasm resources and facilitate marker-assisted breeding for this medicinal herb.

KeywordParis polyphylla transcriptome polyphyllin EST-SSR markers genetic diversity
Subject AreaBiodiversity & Conservation ; Environmental Sciences & Ecology
DOI10.3390/d14080589
Indexed BySCI
Language英语
WOS IDWOS:000846958900001
Citation statistics
Document Type期刊论文
Identifierhttps://ir.xtbg.ac.cn/handle/353005/13125
Collection2012年后新成立研究组
Affiliation1.Chinese Acad Sci, CAS Key Lab Trop Plant Resources & Sustainable Us, Xishuangbanna Trop Bot Garden, Kunming 650223, Yunnan, Peoples R China
2.Univ Sci & Technol China, Sch Life Sci, Hefei 230026, Peoples R China
3.Univ Chinese Acad Sci, Coll Life Sci, Beijing 100049, Peoples R China
4.Yunnan Acad Agr Sci, Inst Med Plants, Kunming 650205, Yunnan, Peoples R China
5.Chinese Acad Sci, Ctr Econ Bot, Core Bot Gardens, Xishuangbanna 666303, Peoples R China
6.Chinese Acad Sci, Innovat Acad Seed Design, Kunming 650223, Yunnan, Peoples R China
Recommended Citation
GB/T 7714
Gao, Xiaoyang,Su, Qixuan,Yao, Baolin,et al. Development of EST-SSR Markers Related to Polyphyllin Biosynthesis Reveals Genetic Diversity and Population Structure in Paris polyphylla[J]. DIVERSITY-BASEL,2022,14(8):-.
APA Gao, Xiaoyang.,Su, Qixuan.,Yao, Baolin.,Yang, Wenjing.,Ma, Weisi.,...&Liu, Changning.(2022).Development of EST-SSR Markers Related to Polyphyllin Biosynthesis Reveals Genetic Diversity and Population Structure in Paris polyphylla.DIVERSITY-BASEL,14(8),-.
MLA Gao, Xiaoyang,et al."Development of EST-SSR Markers Related to Polyphyllin Biosynthesis Reveals Genetic Diversity and Population Structure in Paris polyphylla".DIVERSITY-BASEL 14.8(2022):-.
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