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Different reference genomes determine different results: Comparing SNP calling in RAD-seq of Engelhardia roxburghiana using different reference genomes 期刊论文
PLANT SCIENCE, 2024, 卷号: 344, 期号: _, 页码: _
Authors:  Huang, Pei -Han;  Wang, Tian-Rui;  Li, Min;  Fang, Ou-Yan;  Su, Ren-Ping;  Meng, Hong-Hu;  Song, Yi-Gang;  Li, Jie
Adobe PDF(1531Kb)  |  Favorite  |  View/Download：122/60  |  Submit date：2024/07/22
RAD-seq  STACKS  SNP calling  Reference-based approach  
Quercus zhekunii M.Deng & J.Huang, a new sclerophyllous oak from Guangxi, southwest China 期刊论文
NORDIC JOURNAL OF BOTANY, 2024, 期号: x, 页码: -
Authors:  Deng, Min;  Lin, Lin;  Liu, Lu-Ting;  Huang, Si-Xiang;  Tu, Yu;  Lu, Zhao-Cen;  Huang, Jian
Adobe PDF(4675Kb)  |  Favorite  |  View/Download：41/5  |  Submit date：2024/11/19
Fagaceae  karst area  phylogeny  Quercus sect. Ilex  RAD-seq  taxonomy  
Adaptive divergence and genetic vulnerability of relict species under climate change: a case study of Pterocarya macroptera 期刊论文
ANNALS OF BOTANY, 2023, 卷号: 132, 期号: 2, 页码: 241-254
Authors:  Wang, Tian-Rui;  Meng, Hong-Hu;  Wang, Nian;  Zheng, Si-Si;  Jiang, Yun;  Lin, Duo-Qing;  Song, Yi-Gang;  Kozlowski, Gregor
Adobe PDF(2544Kb)  |  Favorite  |  View/Download：85/48  |  Submit date：2024/05/09
Climate change  genetic offset  genotype-environment association  RAD-seq  relict species  
Genetic diversity of Horsfieldia tetratepala (Myristicaceae), an endangered Plant Species with Extremely Small Populations to China: implications for its conservation 期刊论文
PLANT SYSTEMATICS AND EVOLUTION, 2021, 卷号: 307, 期号: 4, 页码: -
Authors:  Cai, Chaonan;  Xiao, Jianhua;  Ci, Xiuqin;  Conran, John G.;  Li, Jie
Adobe PDF(1650Kb)  |  Favorite  |  View/Download：102/25  |  Submit date：2021/09/08
Conservation  Horsfieldia tetratepala  Plant Species with Extremely Small Populations (PSESP)  Population genetics  Restriction site-associated DNA sequencing (RAD-seq)  
Phylogeny, Taxonomy, and Biogeography of Pterocarya (Juglandaceae) 期刊论文
PLANTS-BASEL, 2020, 卷号: 9, 期号: 11, 页码: _
Authors:  Song, Yi-Gang;  Li, Ying;  Meng, Hong-Hu;  Fragniere, Yann;  Ge, Bin-Jie;  Sakio, Hitoshi;  Yousefzadeh, Hamed;  Betrisey, Sebastien;  Kozlowski, Gregor
Adobe PDF(3190Kb)  |  Favorite  |  View/Download：70/1  |  Submit date：2020/12/31
divergence time  East Asia-southern Caucasus disjunction  Late Miocene diversification  phylogenomic relationship  refugia  restriction site-associated DNA sequencing (RAD-seq)