| Phylogenomics and biogeographical diversification of Collabieae (Orchidaceae) and its implication in the reconstruction of the dynamic history of Asian evergreen broadleaved forests | |
Ji, Hong-Yu; Ye, Chao; Chen, Yan-Qiong; Li, Jian-Wu ; Hidayat, Arief; Miao, Jiang-Lin; Li, Jian-Hua; Wu, Jian-Yong; Zhai, Jun-Wen; Lan, Si-Ren; Jin, Xiao-Hua
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| 2024 | |
| Source Publication | MOLECULAR PHYLOGENETICS AND EVOLUTION
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| ISSN | 1055-7903 |
| Volume | 196Issue:_Pages:_ |
| Abstract | The tribe Collabieae (Epidendroideae, Orchidaceae) comprises approximately 500 species. Generic delimitation within Collabieae are confusing and phylogenetic interrelationships within the Collabieae have not been well resolved. Plastid genomes and nuclear internal transcribed spacer (ITS) sequences were used to estimate the phylogenetic relationships, ancestral ranges, and diversification rates of Collabieae. The results showed that Collabieae was subdivided into nine clades with high support. We proposed to combine Ancistrochilus and Pachystoma into Spathoglottis, merge Collabium and Chrysoglossum into Diglyphosa, and separate Pilophyllum and Hancockia as distinctive genera. The diversification of the nine clades of Collabieae might be associated with the uplift of the Himalayas during the Late Oligocene/Early Miocene. The enhanced East Asian summer monsoon in the Late Miocene may have promoted the rapid diversification of Collabieae at a sustained high diversification rate. The increased size of terrestrial pseudobulbs may be one of the drivers of Collabieae diversification. Our results suggest that the establishment and development of evergreen broadleaved forests facilitated the diversification of Collabieae. |
| Keyword | Collabieae Biogeography Evergreen broadleaved forests Plastid genomes Phylogenomics |
| Subject Area | Biochemistry & Molecular Biology ; Evolutionary Biology ; Genetics & Heredity |
| DOI | 10.1016/j.ympev.2024.108084 |
| Indexed By | SCI |
| Language | 英语 |
| WOS ID | WOS:001236757200001 |
| Citation statistics | |
| Document Type | 期刊论文 |
| Identifier | https://ir.xtbg.ac.cn/handle/353005/14227 |
| Collection | 支撑系统 |
| Affiliation | 1.[Ji, Hong-Yu 2.Ye, Chao 3.Inst Bot, Chinese Acad Sci, State Key Lab Plant Divers & Special Crops, Beijing, Peoples R China 4.Miao, Jiang-Lin 5.Zhai, Jun-Wen 6.Fujian Agr & Forestry Univ, Coll Landscape Architecture, Key Lab Natl Forestry & Grassland Adm Orchid Conse, Fuzhou, Peoples R China 7.Minjiang Univ, Coll Geog & Oceanog, Fuzhou, Peoples R China 8.Chinese Acad Sci, Xishuangbanna Trop Bot Garden, Kunming, Yunnan, Peoples R China 9.[Hidayat, Arief 10.Natl Res & Innovat Agcy, Res Ctr Biosystemat & Evolut, Cibinong, Indonesia 11.Hope Coll, Holland, MI USA 12.Minist Ecol & Environm MEE, Nanjing Inst Environm Sci, Nanjing, Peoples R China 13.China Natl Bot Garden, Beijing, Peoples R China 14.[Zhai, Jun-Wen 15.Lan, Si-Ren 16.Inst Bot, Chinese Acad Sci, State Key Lab Systemat & Evolutionary Bot, Beijing, Peoples R China |
| Recommended Citation GB/T 7714 | Ji, Hong-Yu,Ye, Chao,Chen, Yan-Qiong,et al. Phylogenomics and biogeographical diversification of Collabieae (Orchidaceae) and its implication in the reconstruction of the dynamic history of Asian evergreen broadleaved forests[J]. MOLECULAR PHYLOGENETICS AND EVOLUTION,2024,196(_):_. |
| APA | Ji, Hong-Yu.,Ye, Chao.,Chen, Yan-Qiong.,Li, Jian-Wu.,Hidayat, Arief.,...&Jin, Xiao-Hua.(2024).Phylogenomics and biogeographical diversification of Collabieae (Orchidaceae) and its implication in the reconstruction of the dynamic history of Asian evergreen broadleaved forests.MOLECULAR PHYLOGENETICS AND EVOLUTION,196(_),_. |
| MLA | Ji, Hong-Yu,et al."Phylogenomics and biogeographical diversification of Collabieae (Orchidaceae) and its implication in the reconstruction of the dynamic history of Asian evergreen broadleaved forests".MOLECULAR PHYLOGENETICS AND EVOLUTION 196._(2024):_. |
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| Phylogenomics and bi(2495KB) | 期刊论文 | 出版稿 | 开放获取 | CC BY-NC-SA | View Download | |
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