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Phylogenomics and biogeographical diversification of Collabieae (Orchidaceae) and its implication in the reconstruction of the dynamic history of Asian evergreen broadleaved forests
Ji, Hong-Yu; Ye, Chao; Chen, Yan-Qiong; Li, Jian-Wu; Hidayat, Arief; Miao, Jiang-Lin; Li, Jian-Hua; Wu, Jian-Yong; Zhai, Jun-Wen; Lan, Si-Ren; Jin, Xiao-Hua
2024
Source PublicationMOLECULAR PHYLOGENETICS AND EVOLUTION
ISSN1055-7903
Volume196Issue:_Pages:_
Abstract

The tribe Collabieae (Epidendroideae, Orchidaceae) comprises approximately 500 species. Generic delimitation within Collabieae are confusing and phylogenetic interrelationships within the Collabieae have not been well resolved. Plastid genomes and nuclear internal transcribed spacer (ITS) sequences were used to estimate the phylogenetic relationships, ancestral ranges, and diversification rates of Collabieae. The results showed that Collabieae was subdivided into nine clades with high support. We proposed to combine Ancistrochilus and Pachystoma into Spathoglottis, merge Collabium and Chrysoglossum into Diglyphosa, and separate Pilophyllum and Hancockia as distinctive genera. The diversification of the nine clades of Collabieae might be associated with the uplift of the Himalayas during the Late Oligocene/Early Miocene. The enhanced East Asian summer monsoon in the Late Miocene may have promoted the rapid diversification of Collabieae at a sustained high diversification rate. The increased size of terrestrial pseudobulbs may be one of the drivers of Collabieae diversification. Our results suggest that the establishment and development of evergreen broadleaved forests facilitated the diversification of Collabieae.

KeywordCollabieae Biogeography Evergreen broadleaved forests Plastid genomes Phylogenomics
Subject AreaBiochemistry & Molecular Biology ; Evolutionary Biology ; Genetics & Heredity
DOI10.1016/j.ympev.2024.108084
Indexed BySCI
Language英语
WOS IDWOS:001236757200001
Citation statistics
Document Type期刊论文
Identifierhttps://ir.xtbg.ac.cn/handle/353005/14227
Collection支撑系统
Affiliation1.[Ji, Hong-Yu
2.Ye, Chao
3.Inst Bot, Chinese Acad Sci, State Key Lab Plant Divers & Special Crops, Beijing, Peoples R China
4.Miao, Jiang-Lin
5.Zhai, Jun-Wen
6.Fujian Agr & Forestry Univ, Coll Landscape Architecture, Key Lab Natl Forestry & Grassland Adm Orchid Conse, Fuzhou, Peoples R China
7.Minjiang Univ, Coll Geog & Oceanog, Fuzhou, Peoples R China
8.Chinese Acad Sci, Xishuangbanna Trop Bot Garden, Kunming, Yunnan, Peoples R China
9.[Hidayat, Arief
10.Natl Res & Innovat Agcy, Res Ctr Biosystemat & Evolut, Cibinong, Indonesia
11.Hope Coll, Holland, MI USA
12.Minist Ecol & Environm MEE, Nanjing Inst Environm Sci, Nanjing, Peoples R China
13.China Natl Bot Garden, Beijing, Peoples R China
14.[Zhai, Jun-Wen
15.Lan, Si-Ren
16.Inst Bot, Chinese Acad Sci, State Key Lab Systemat & Evolutionary Bot, Beijing, Peoples R China
Recommended Citation
GB/T 7714
Ji, Hong-Yu,Ye, Chao,Chen, Yan-Qiong,et al. Phylogenomics and biogeographical diversification of Collabieae (Orchidaceae) and its implication in the reconstruction of the dynamic history of Asian evergreen broadleaved forests[J]. MOLECULAR PHYLOGENETICS AND EVOLUTION,2024,196(_):_.
APA Ji, Hong-Yu.,Ye, Chao.,Chen, Yan-Qiong.,Li, Jian-Wu.,Hidayat, Arief.,...&Jin, Xiao-Hua.(2024).Phylogenomics and biogeographical diversification of Collabieae (Orchidaceae) and its implication in the reconstruction of the dynamic history of Asian evergreen broadleaved forests.MOLECULAR PHYLOGENETICS AND EVOLUTION,196(_),_.
MLA Ji, Hong-Yu,et al."Phylogenomics and biogeographical diversification of Collabieae (Orchidaceae) and its implication in the reconstruction of the dynamic history of Asian evergreen broadleaved forests".MOLECULAR PHYLOGENETICS AND EVOLUTION 196._(2024):_.
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