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CRISPRlnc: a machine learning method for lncRNA-specific single-guide RNA design of CRISPR/Cas9 system 期刊论文
BRIEFINGS IN BIOINFORMATICS, 2024, 卷号: 25, 期号: 2, 页码: _
Authors:  Yang, Zitian;  Zhang, Zexin;  Li, Jing;  Chen, Wen;  Liu, Changning
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CRISPR/Cas9  machine learning  lncRNA  sgRNA  
Extended mining of the oil biosynthesis pathway in biofuel plant Jatropha curcas by combined analysis of transcriptome and gene interactome data 期刊论文
BMC BIOINFORMATICS, 2021, 卷号: 22, 期号: SUPPL 6, 页码: -
Authors:  Zhang, Xuan;  Li, Jing;  Pan, Bang-Zhen;  Chen, Wen;  Chen, Maosheng;  Tang, Mingyong;  Xu, Zeng-Fu;  Liu, Changning
Adobe PDF(1787Kb)  |  Favorite  |  View/Download：65/6  |  Submit date：2021/09/08
Extended mining  Oil biosynthesis  Jatropha curcas  Transcriptome  Gene interactome  
Genome-Wide Identification and Characterization of the SHI-Related Sequence Gene Family in Rice 期刊论文
EVOLUTIONARY BIOINFORMATICS, 2020, 卷号: 16, 期号: x, 页码: -
Authors:  Yang, Jun;  Xu, Peng;  Yu, Diqiu
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GIBBERELLIN RESPONSES  ARABIDOPSIS  AUXIN  BIOSYNTHESIS  SMART  STY1  
WGDdetector: a pipeline for detecting whole genome duplication events using the genome or transcriptome annotations 期刊论文
BMC BIOINFORMATICS, 2019, 卷号: 20, 期号: x, 页码: -
Authors:  Yang, Yongzhi;  Li, Ying;  Chen, Qiao;  Sun, Yongshuai;  Lu, Zhiqiang
Adobe PDF(893Kb)  |  Favorite  |  View/Download：155/14  |  Submit date：2019/04/22
Sequence  Gene  Polyploidy  Protein  Plants  Evolution  Inference  Reveals  Dosage  
Inference of Markovian properties of molecular sequences from NGS data and applications to comparative genomics 期刊论文
BIOINFORMATICS, 2016, 卷号: 32, 期号: 7, 页码: 993-1000
Authors:  Ren, Jie;  Song, Kai;  Deng, Minghua;  Reinert, Gesine;  Cannon, Charles H.;  Sun, Fengzhu
Adobe PDF(1927Kb)  |  Favorite  |  View/Download：194/58  |  Submit date：2016/06/06
Dna-sequences  Statistical-inference  Chain Analysis  Alignment  Metagenomics  Frequencies  Prediction  Enhancers  Browser  Words  
ngsTools: methods for population genetics analyses from next-generation sequencing data 期刊论文
BIOINFORMATICS, 2014, 卷号: 30, 期号: 10, 页码: 1486-1487
Authors:  Fumagalli, Matteo;  Vieira, Filipe G.;  Linderoth, Tyler;  Nielsen, Rasmus
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A novel cell nuclei segmentation method for 3D C. elegans embryonic time-lapse images 期刊论文
Bmc Bioinformatics, 2013, 卷号: 14, 页码: 12
Authors:  Chen, L.
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Exploiting sparseness in de novo genome assembly 期刊论文
BMC Bioinformatics, 2012, 卷号: 13, 期号: Suppl 6, 页码: S1
Authors:  Chengxi Ye*;  Zhanshan S Ma;  Charles H Cannon;  Mihai Pop*;  Douglas W Yu*
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Exploiting sparseness in de novo genome assembly 会议论文
BMC BIOINFORMATICS, APR 19-20, 2012
Authors:  Ye, Chengxi;  Ma, Zhanshan Sam;  Cannon, Charles H.;  Pop, Mihai;  Yu, Douglas W.
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Picante: R tools for integrating phylogenies and ecology 期刊论文
Bioinformatics, 2010, 卷号: 26, 期号: x, 页码: 1463-1464
Authors:  Kembel, S. W.;  Cowan, P. D.;  Helmus, M. R.;  Cornwell, W. K.;  Morlon, H.;  Ackerly, D. D.;  Blomberg, S. P.;  Webb, C. O.
Adobe PDF(67Kb)  |  Favorite  |  View/Download：1700/589  |  Submit date：2012/05/17