Genome-wide analysis of gene expression reveals gene regulatory networks that regulate chasmogamous and cleistogamous flowering in Pseudostellaria heterophylla (Caryophyllaceae)

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	Genome-wide analysis of gene expression reveals gene regulatory networks that regulate chasmogamous and cleistogamous flowering in Pseudostellaria heterophylla (Caryophyllaceae)
	Luo, Yan; Hu, Jin-Yong; Li, Lu; et al
	2016
Source Publication	BMC GENOMICS
Volume	17 Issue:382
Abstract	Background: Pseudostellaria heterophylla produces both closed (cleistogamous, CL) and open (chasmogamous, CH) flowers on the same individual but in different seasons. The production of CH and CL flowers might be in response to environmental changes. To better understand the molecular mechanisms of CH and CL flowering, we compared the transcriptome of the two types of flowers to examine differential gene expression patterns, and to identify gene regulatory networks that control CH and CL flowering. Results: Using RNA sequencing, we identified homologues of 428 Arabidopsis genes involved in regulating flowering processes and estimated the differential gene expression patterns between CH and CL flowers. Some of these genes involved in gene regulatory networks of flowering processes showed significantly differential expression patterns between CH and CL flowers. In addition, we identified another 396 differentially expressed transcripts between CH and CL flowers. Some are involved in environmental stress responses and flavonoid biosynthesis. Conclusions: We propose how the differential expression of key members of three gene regulatory modules may explain CH and CL flowering. Future research is needed to investigate how the environment impinges on these flowering pathways to regulate CH and CL flowering in P. heterophylla.
Keyword	Rna-seq Transcriptome Cleistogamy Cleistogamous Flowers Chasmogamous Flowers Environmental Response
Document Type	期刊论文
Identifier	https://ir.xtbg.ac.cn/handle/353005/9899
Collection	植物进化生态研究组
Recommended Citation GB/T 7714	Luo, Yan,Hu, Jin-Yong,Li, Lu,et al. Genome-wide analysis of gene expression reveals gene regulatory networks that regulate chasmogamous and cleistogamous flowering in Pseudostellaria heterophylla (Caryophyllaceae)[J]. BMC GENOMICS,2016,17(382).
APA	Luo, Yan,Hu, Jin-Yong,Li, Lu,&et al.(2016).Genome-wide analysis of gene expression reveals gene regulatory networks that regulate chasmogamous and cleistogamous flowering in Pseudostellaria heterophylla (Caryophyllaceae).BMC GENOMICS,17(382).
MLA	Luo, Yan,et al."Genome-wide analysis of gene expression reveals gene regulatory networks that regulate chasmogamous and cleistogamous flowering in Pseudostellaria heterophylla (Caryophyllaceae)".BMC GENOMICS 17.382(2016).

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