Institutional Repository of Xishuangbanna Tropical Botanical Garden
| DNA Barcoding Reveals Cryptic Diversity and Informs Conservation Priorities in Chinese Firmiana Species (Malvaceae) Using Genome Skimming DataDNA () : | |
Yan, Li-Jun; Li, Ruo-Zhu; Xiao, Yun-Xue; Corlett, Richard T.; Liu, Yan5; Yu, Zhi-Xiang; Luo, Rong-Sheng; Yang, Jing8; Yu, Wen-Bin
| |
| 2025 | |
| Source Publication | INTEGRATIVE CONSERVATION
![]() |
| ISSN | 2770-9329 |
| Issue | xPages:- |
| Abstract | Accurate species delineation is crucial for biodiversity conservation. The genus Firmiana Marsili (Malvaceae) comprises deciduous trees and shrubs, many of which are rare and endangered in China, underscoring the urgent need for effective conservation measures. However, morphological similarities among closely related Firmiana species complicate taxonomic identification, and traditional morphology-based approaches are often insufficient for taxa with complicated evolutionary histories. To address this, we conducted genome skimming on 62 Firmiana samples representing all 10 recognized Chinese species and two unidentified taxa, assembling plastome and nuclear ribosomal DNA sequences. We evaluated the effectiveness of super-barcodes (plastid genomes and nrDNA), plastid hyper-variable barcodes, and four universal barcodes. Our results show that nrITS exhibited the highest discriminatory power, successfully identifying all 10 recognized Firmiana species, and is thus recommended as the primary barcode for the genus. In addition, two cryptic lineages were discovered within the Firmiana major complex. These results provide critical insights for the conservation, management, and sustainable use of endangered Firmiana species. This study underscores the urgent need to revise species boundaries within the F. major complex, and highlights the potential of DNA barcoding as an efficient tool for species identification and conservation of the genus Firmiana. |
| Keyword | conservation DNA barcode identification phylogeny plastome DNA |
| Subject Area | Biodiversity & Conservation |
| DOI | 10.1002/inc3.70047 |
| Language | 英语 |
| WOS ID | WOS:001575165900001 |
| Citation statistics | |
| Document Type | 期刊论文 |
| Identifier | https://ir.xtbg.ac.cn/handle/353005/15792 |
| Collection | Integrative Conservation |
| Affiliation | 1.Chinese Acad Sci, Ctr Integrat Conservat, Mengla, Yunnan, Peoples R China 2.Chinese Acad Sci, Yunnan Key Lab Conservat Trop Rainforests & Asian, Xishuangbanna Trop Bot Garden, Mengla, Yunnan, Peoples R China 3.Chinese Acad Sci, Yunnan Int Joint Lab Conservat & Utilizat Trop Tim, Xishuangbanna Trop Bot Garden, Mengla, Yunnan, Peoples R China 4.Univ Chinese Acad Sci, Beijing, Peoples R China 5.Chinese Acad Sci, Ctr Gardening & Hort, Xishuangbanna Trop Bot Garden, Mengla, Yunnan, Peoples R China 6.Guangxi Zhuang Autonomous Reg & Chinese Acad Sci, Guangxi Inst Bot, Guangxi Key Lab Plant Conservat & Restorat Ecol Ka, Guilin, Guangxi, Peoples R China 7.Sichuan Panzhihua Cycas Natl Nat Reserve, Panzhihua, Sichuan, Peoples R China 8.Southwest Forestry Univ, Coll Forestry, Kunming, Yunnan, Peoples R China 9.Chinese Acad Sci, Kunming Inst Bot, Yunnan Key Lab integrat conservat Plant Species ex, Kunming, Yunnan, Peoples R China 10.Chinese Acad Sci, Southeast Asia Biodivers Res Inst, Mengla, Yunnan, Peoples R China |
| Recommended Citation GB/T 7714 | Yan, Li-Jun,Li, Ruo-Zhu,Xiao, Yun-Xue,et al. DNA Barcoding Reveals Cryptic Diversity and Informs Conservation Priorities in Chinese Firmiana Species (Malvaceae) Using Genome Skimming DataDNA () :[J]. INTEGRATIVE CONSERVATION,2025(x):-. |
| APA | Yan, Li-Jun.,Li, Ruo-Zhu.,Xiao, Yun-Xue.,Corlett, Richard T..,Liu, Yan.,...&Yu, Wen-Bin.(2025).DNA Barcoding Reveals Cryptic Diversity and Informs Conservation Priorities in Chinese Firmiana Species (Malvaceae) Using Genome Skimming DataDNA () :.INTEGRATIVE CONSERVATION(x),-. |
| MLA | Yan, Li-Jun,et al."DNA Barcoding Reveals Cryptic Diversity and Informs Conservation Priorities in Chinese Firmiana Species (Malvaceae) Using Genome Skimming DataDNA () :".INTEGRATIVE CONSERVATION .x(2025):-. |
| Files in This Item: | Download All | |||||
| File Name/Size | DocType | Version | Access | License | ||
| DNA Barcoding Reveal(8316KB) | 期刊论文 | 作者接受稿 | 开放获取 | CC BY-NC-SA | View Download | |
Items in the repository are protected by copyright, with all rights reserved, unless otherwise indicated.
Edit Comment