| Genome-Wide Identification and Expression Analysis of the PHD Finger Gene Family in Pea (Pisum sativum) | |
Liu, Mingli1; Li, Wenju1; Zheng, Xiaoling1,2; Yuan, Zhuo1,2; Zhou, Yueqiong1,2; Yang, Jing1,3; Mao, Yawen1,2; Wang, Dongfa1,4; Wu, Qing1,2; He, Yexin1; He, Liangliang1,2; Zong, Dan; Chen, Jianghua1,2
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| 2024 | |
| Source Publication | PLANTS-BASEL
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| ISSN | 2223-7747 |
| Volume | 13Issue:11Pages:_ |
| Abstract | The plant homeodomain finger (PHD finger) protein, a type of zinc finger protein extensively distributed in eukaryotes, plays diverse roles in regulating plant growth and development. While PHD finger proteins have been identified in various species, their functions remain largely unexplored in pea (Pisum sativum). In this study, we identified 84 members of the PHD finger gene family in pea, which displayed an uneven distribution across seven chromosomes. Through a comprehensive analysis using data from Arabidopsis thaliana and Medicago truncatula, we categorized the PHD finger proteins into 20 subfamilies via phylogenetic tree analysis. Each subfamily exhibited distinct variations in terms of quantity, genetic structure, conserved domains, and physical and chemical properties. Collinearity analysis revealed conserved evolutionary relationships among the PHD finger genes across the three different species. Furthermore, we identified the conserved and important roles of the subfamily M members in anther development. RT-qPCR and in situ hybridization revealed high expression of the pea subfamily M members PsPHD11 and PsPHD16 in microspores and the tapetum layer. In conclusion, this analysis of the PHD finger family in pea provides valuable guidance for future research on the biological roles of PHD finger proteins in pea and other leguminous plants. |
| Keyword | Pisum sativum PHD finger gene family anther development |
| Subject Area | Plant Sciences |
| DOI | 10.3390/plants13111489 |
| Indexed By | SCI |
| Language | 英语 |
| WOS ID | WOS:001246783900001 |
| Citation statistics | |
| Document Type | 期刊论文 |
| Identifier | https://ir.xtbg.ac.cn/handle/353005/14255 |
| Collection | 2012年后新成立研究组 |
| Affiliation | 1.Southwest Forestry Univ, Sch Life Sci, Kunming 650224, Peoples R China 2.Chinese Acad Sci, CAS Ctr Excellence Mol Plant Sci, CAS Key Lab Trop Plant Resources & Sustainable Use, Xishuangbanna Trop Bot Garden, Kunming 650223, Peoples R China 3.Univ Chinese Acad Sci, Beijing 100049, Peoples R China 4.Yunnan Univ, Sch Ecol & Environm Sci, Kunming 650504, Peoples R China 5.Univ Sci & Technol China, Sch Life Sci, Hefei 230027, Peoples R China |
| Recommended Citation GB/T 7714 | Liu, Mingli,Li, Wenju,Zheng, Xiaoling,et al. Genome-Wide Identification and Expression Analysis of the PHD Finger Gene Family in Pea (Pisum sativum)[J]. PLANTS-BASEL,2024,13(11):_. |
| APA | Liu, Mingli.,Li, Wenju.,Zheng, Xiaoling.,Yuan, Zhuo.,Zhou, Yueqiong.,...&Chen, Jianghua.(2024).Genome-Wide Identification and Expression Analysis of the PHD Finger Gene Family in Pea (Pisum sativum).PLANTS-BASEL,13(11),_. |
| MLA | Liu, Mingli,et al."Genome-Wide Identification and Expression Analysis of the PHD Finger Gene Family in Pea (Pisum sativum)".PLANTS-BASEL 13.11(2024):_. |
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| Genome-Wide Identifi（6036KB） | 期刊论文 | 出版稿 | 开放获取 | CC BY-NC-SA | View Download | |
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