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Echoes of ancient introgression punctuate stable genomic lineages in the evolution of figs
Gardner, Elliot M.; Bruun-Lund, Sam; Niissalo, Matti2; Chantarasuwan, Bhanumas4; Clement, Wendy L.; Geri, Connie6; Harrison, Rhett D.; Hipp, Andrew L.; Holvoet, Maxime3; Khew, Gillian2; Kjellberg, Finn9; Liao, Shuai8,10,11; Pederneiras, Leandro Cardoso12; Peng, Yan-Qiong; Pereira, Joan T.; Phillipps, Quentin15; Puad, Aida Shafreena Ahmad16; Rasplus, Jean-Yves; Sang, Julia18; Schou, Sverre Juul3; Velautham, Elango2; Weiblen, George D.; Zerega, Nyree J. C.; Zhang, Qian23; Zhang, Zhen11; Baraloto, Christopher; Ronste, Nina1,3
2023
Source PublicationPROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
ISSN0027-8424
Volume120Issue:28Pages:-
Abstract

Studies investigating the evolution of flowering plants have long focused on isolating mechanisms such as pollinator specificity. Some recent studies have proposed a role for introgressive hybridization between species, recognizing that isolating processes such as pollinator specialization may not be complete barriers to hybridization. Occasional hybridization may therefore lead to distinct yet reproductively connected lineages. We investigate the balance between introgression and reproductive isolation in a diverse clade using a densely sampled phylogenomic study of fig trees (Ficus, Moraceae). Codiversification with specialized pollinating wasps (Agaonidae) is recognized as a major engine of fig diversity, leading to about 850 species. Nevertheless, some studies have focused on the importance of hybridization in Ficus, highlighting the consequences of pollinator sharing. Here, we employ dense taxon sampling (520 species) throughout Moraceae and 1,751 loci to investigate phylogenetic relationships and the prevalence of introgression among species throughout the history of Ficus. We present a well-resolved phylogenomic backbone for Ficus, providing a solid foundation for an updated classification. Our results paint a picture of phylogenetically stable evolution within lineages punctuated by occasional local introgression events likely mediated by local pollinator sharing, illustrated by clear cases of cytoplasmic introgression that have been nearly drowned out of the nuclear genome through subsequent lineage fidelity. The phylogenetic history of figs thus highlights that while hybridization is an important process in plant evolution, the mere ability of species to hybridize locally does not necessarily translate into ongoing introgression between distant lineages, particularly in the presence of obligate plant-pollinator relationships.

KeywordFicus hybridization Moraceae phylogenomics
Subject AreaScience & Technology - Other Topics
DOIhttp://dx.doi.org/10.1073/pnas.2222035120
Indexed BySCI
Language英语
WOS IDWOS:001039518700007
Citation statistics
Document Type期刊论文
Identifierhttps://ir.xtbg.ac.cn/handle/353005/13870
Collection协同进化组
Affiliation1.Florida Int Univ, Kampong Inst Environm, Int Ctr Trop Bot, Miami, FL 33133 USA
2.Natl Trop Bot Garden, Kalaheo, HI 96741 USA
3.Natl Pk Board, Singapore Bot Gardens, Singapore 259569, Singapore
4.Univ Copenhagen, Nat Hist Museum Denmark, DK-1123 Copenhagen, Denmark
5.Thailand Natl Hist Museum, Natl Sci Museum, Klongluang 12120, Pathum Thani, Thailand
6.Clement, Wendy L.] Coll New Jersey, Dept Biol, Ewing, NJ 08618 USA
7.Sarawak Forestry Corp, Kuching 93250, Sarawak, Malaysia
8.Harrison, Rhett D.] CIFOR ICRAF, St Eugene Off Pk, Lusaka 10101, Zambia
9.Morton Arboretum, Lisle, IL 60532 USA
10.Univ Montpellier, CEFE, CNRS, EPHE,IRD, F-34090 Montpellier, France
11.Chinese Acad Sci, South China Bot Garden, Guangzhou 510650, Peoples R China
12.East China Normal Univ, Sch Life Sci, Shanghai 200241, Peoples R China
13.Inst Pesquisa Jardim Bot Rio De Janeiro, Diretoria Pesquisa Cient, BR-22460030 Rio De Janeiro, RJ, Brazil
14.Chinese Acad Sci, Key Lab Trop Forest Ecol, Xishuangbanna Trop Bot Garden, Mengla 666303, Peoples R China
15.Pereira, Joan T.] Sabah Forestry Dept, Sabah Forest Res Ctr, Sandakan 90175, Sabah, Malaysia
16.Borneo Res Consultants, London W3 0HA, England
17.i CATS Univ Coll, Fac Agr & Appl Sci, Kuching 93350, Sarawak, Malaysia
18.Univ Montpellier, CBGP, INRAE, CIRAD,IRD,Montpellier SupAgro, F-34988 Montpellier, France
19.Sarawak Forest Dept, Kuching 34988, Sarawak, Malaysia
20.Weiblen, George D.] Univ Minnesota, Bell Museum, St Paul, MN 55113 USA
21.Weiblen, George D.] Univ Minnesota, Dept Plant Biol, St Paul, MN 55108 USA
22.Zerega, Nyree J. C.] Northwestern Univ, Plant Biol & Conservat, Evanston, IL 60208 USA
23.Zerega, Nyree J. C.] Negaunee Inst Plant Conservat & Act, Chicago Bot Garden, Glencoe, IL 60022 USA
24.Chinese Acad Sci, Inst Bot, State Key Lab Systemat & Evolutionary Bot, Beijing 100093, Peoples R China
Recommended Citation
GB/T 7714
Gardner, Elliot M.,Bruun-Lund, Sam,Niissalo, Matti,et al. Echoes of ancient introgression punctuate stable genomic lineages in the evolution of figs[J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA,2023,120(28):-.
APA Gardner, Elliot M..,Bruun-Lund, Sam.,Niissalo, Matti.,Chantarasuwan, Bhanumas.,Clement, Wendy L..,...&Ronste, Nina.(2023).Echoes of ancient introgression punctuate stable genomic lineages in the evolution of figs.PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA,120(28),-.
MLA Gardner, Elliot M.,et al."Echoes of ancient introgression punctuate stable genomic lineages in the evolution of figs".PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 120.28(2023):-.
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