Characterization of the complete chloroplast genome of Dalbergia congesta (Fabaceae), an endangered legume endemic to the Nilgiri Hills of Tamil Nadu, India

doi:10.1007/s10142-023-01047-7

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	Characterization of the complete chloroplast genome of Dalbergia congesta (Fabaceae), an endangered legume endemic to the Nilgiri Hills of Tamil Nadu, India
	Rather, Shabir A.; Wang, Ting 2; Liu, Hongmei 1; Schneider, Harald 1
	2023
Source Publication	FUNCTIONAL & INTEGRATIVE GENOMICS
ISSN	1438-793X
Volume	23 Issue:2 Pages:-
Abstract	Reference-guided de novo assembly of the Dalbergia congesta chloroplast genome was carried out using whole-genome sequencing data. The newly generated chloroplast genome size had a total length of 156,048 bp and a GC content of 36.1%. The plastome showed the classical quadripartite structure with two inverted repeats regions (IRs; each 25,715 bp) separating the large single-copy region (LSC; 85,456 bp) from the small single-copy region (SSC; 19,162 bp). The plastid genome contained 111 unique genes, including 77 protein-coding genes (CDS), 30 tRNAs, and 4 rRNAs. The phylogenomic analyses based on whole chloroplast genome sequences recovered Dalbergia as a distinct clade of the Papilionoideae, with Dalbergia congesta having a sister relationship to a clade comprising D. fusca and D. cultrata. The newly available plastome sequence will facilitate future genetic and conservational research aiming to protect this economically important but highly threatened legume species.
Subject Area	Genetics & Heredity
DOI	10.1007/s10142-023-01047-7
Indexed By	SCI
Language	英语
WOS ID	WOS:000971030200002
Citation statistics
Document Type	期刊论文
Identifier	https://ir.xtbg.ac.cn/handle/353005/13435
Collection	2012年后新成立研究组
Affiliation	1.Chinese Acad Sci, Ctr Integrat Conservat, Menglun 666303, Yunnan, Peoples R China 2.Chinese Acad Sci, Yunnan Key Lab Conservat Trop Rainforests & Asian, Xishuangbanna Trop Bot Garden, Mengla 666303, Yunnan, Peoples R China 3.Nanjing Normal Univ, Coll Life Sci, Nanjing 210098, Peoples R China
Recommended Citation GB/T 7714	Rather, Shabir A.,Wang, Ting,Liu, Hongmei,et al. Characterization of the complete chloroplast genome of Dalbergia congesta (Fabaceae), an endangered legume endemic to the Nilgiri Hills of Tamil Nadu, India[J]. FUNCTIONAL & INTEGRATIVE GENOMICS,2023,23(2):-.
APA	Rather, Shabir A.,Wang, Ting,Liu, Hongmei,&Schneider, Harald.(2023).Characterization of the complete chloroplast genome of Dalbergia congesta (Fabaceae), an endangered legume endemic to the Nilgiri Hills of Tamil Nadu, India.FUNCTIONAL & INTEGRATIVE GENOMICS,23(2),-.
MLA	Rather, Shabir A.,et al."Characterization of the complete chloroplast genome of Dalbergia congesta (Fabaceae), an endangered legume endemic to the Nilgiri Hills of Tamil Nadu, India".FUNCTIONAL & INTEGRATIVE GENOMICS 23.2(2023):-.

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