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The genomic basis of adaptation to high-altitude habitats in the eastern honey bee (Apis cerana)
Montero-Mendieta, Santiago; Tan, Ken1; Christmas, Matthew J.; Olsson, Anna; Vila, Carles; Wallberg, Andreas; Webster, Matthew T.
2019
Source PublicationMOLECULAR ECOLOGY
ISSN0962-1083
Volume28Issue:4Pages:746-760
Abstract

The eastern honey bee (Apis cerana) is of central importance for agriculture in Asia. It has adapted to a wide variety of environmental conditions across its native range in southern and eastern Asia, which includes high-altitude regions. eastern honey bees inhabiting mountains differ morphologically from neighbouring lowland populations and may also exhibit differences in physiology and behaviour. We compared the genomes of 60 eastern honey bees collected from high and low altitudes in Yunnan and Gansu provinces, China, to infer their evolutionary history and to identify candidate genes that may underlie adaptation to high altitude. Using a combination of F-ST-based statistics, long-range haplotype tests and population branch statistics, we identified several regions of the genome that appear to have been under positive selection. These candidate regions were strongly enriched for coding sequences and had high haplotype homozygosity and increased divergence specifically in highland bee populations, suggesting they have been subjected to recent selection in high-altitude habitats. Candidate loci in these genomic regions included genes related to reproduction and feeding behaviour in honey bees. Functional investigation of these candidate loci is necessary to fully understand the mechanisms of adaptation to high-altitude habitats in the eastern honey bee.

KeywordSet Enrichment Analysis Drosophila-melanogaster Demographic History Soft Sweeps Body-size Mellifera Ancestry Gene Association Populations
Subject AreaBiochemistry & Molecular Biology ; Environmental Sciences & Ecology ; Evolutionary Biology
DOI10.1111/mec.14986
Indexed BySCI
Language英语
WOS IDWOS:000459814500005
Citation statistics
Document Type期刊论文
Identifierhttps://ir.xtbg.ac.cn/handle/353005/11202
Collection2012年后新成立研究组
Affiliation1.Donana Biol Stn EBD CSIC, Conservat & Evolutionary Genet Grp, Seville, Spain
2.Chinese Acad Sci, Xishuangbanna Trop Bot Garden, Key Lab Trop Forest Ecol, Kunming, Yunnan, Peoples R China
3.Christmas, Matthew J.; Olsson, Anna; Wallberg, Andreas; Webster, Matthew T.] Uppsala Univ, Dept Med Biochem & Microbiol, Sci Life Lab, Uppsala, Sweden
Recommended Citation
GB/T 7714
Montero-Mendieta, Santiago,Tan, Ken,Christmas, Matthew J.,et al. The genomic basis of adaptation to high-altitude habitats in the eastern honey bee (Apis cerana)[J]. MOLECULAR ECOLOGY,2019,28(4):746-760.
APA Montero-Mendieta, Santiago.,Tan, Ken.,Christmas, Matthew J..,Olsson, Anna.,Vila, Carles.,...&Webster, Matthew T..(2019).The genomic basis of adaptation to high-altitude habitats in the eastern honey bee (Apis cerana).MOLECULAR ECOLOGY,28(4),746-760.
MLA Montero-Mendieta, Santiago,et al."The genomic basis of adaptation to high-altitude habitats in the eastern honey bee (Apis cerana)".MOLECULAR ECOLOGY 28.4(2019):746-760.
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