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Complete chloroplast genome sequence of a subtropical tree, Parasassafras confertiflorum (Lauranceae)
Liao, Qiong; Ye, Tinghong; Song, Yu1,2
2018
Source PublicationMITOCHONDRIAL DNA PART B-RESOURCES
ISSN2380-2359
Volume3Issue:2Pages:1216-1217
Abstract

Parasassafras confertiflorum (Meisn.) D.G. Long is the single tree species of the genus Parasassafras D.G. Long in the family Lauraceae. To better determine its phylogenetic location with respect to the related Lauraceae species, the complete chloroplast genome of P. confertiflorum was sequenced. The whole plastome is 152,555bp in length, consisting of a pair of inverted repeat (IR) regions of 20,079bp, one large single copy (LSC) region of 93,604bp, and one small single copy (SSC) region of 18,793bp. The genome contains 127 genes, including 83 protein-coding genes, 8 ribosomal RNA genes, and 36 transfer RNA genes. The overall GC content of the whole plastome is 39.1%. Further, maximum likelihoodphylogenetic analyses were conducted using 34 complete plastomes of the Lauraceae, which support close relationships between P. confertiflorum and Actinodaphne trichocarpa, Lindera benzoin, L. latifolia, L. metcalfiana, L. robusta, and Neolitsea sericea rather than Laurus nobilis or Sinosassafras flavinervium.

Departmentxtbg-ir
KeywordParasassafras Confertiflorum Lauraceae Chloroplast Genome Phylogenetic Analyses
Subject AreaGenetics & Heredity
DOI10.1080/23802359.2018.1532331
Indexed BySCI
Language英语
WOS IDWOS:000448986700003
Citation statistics
Document Type期刊论文
Identifierhttps://ir.xtbg.ac.cn/handle/353005/11135
Collection2012年后新成立研究组
Affiliation1.Sichuan Univ, West China Hosp, State Key Lab Biotherapy, Chengdu, Sichuan, Peoples R China
2.Chinese Acad Sci, Ctr Integrat Conservat, Xishuangbanna Trop Bot Garden, Mengla, Peoples R China
3.Chinese Acad Sci, Southeast Asia Biodivers Res Inst, Yezin, Nay Pyi Taw, Myanmar
Recommended Citation
GB/T 7714
Liao, Qiong,Ye, Tinghong,Song, Yu. Complete chloroplast genome sequence of a subtropical tree, Parasassafras confertiflorum (Lauranceae)[J]. MITOCHONDRIAL DNA PART B-RESOURCES,2018,3(2):1216-1217.
APA Liao, Qiong,Ye, Tinghong,&Song, Yu.(2018).Complete chloroplast genome sequence of a subtropical tree, Parasassafras confertiflorum (Lauranceae).MITOCHONDRIAL DNA PART B-RESOURCES,3(2),1216-1217.
MLA Liao, Qiong,et al."Complete chloroplast genome sequence of a subtropical tree, Parasassafras confertiflorum (Lauranceae)".MITOCHONDRIAL DNA PART B-RESOURCES 3.2(2018):1216-1217.
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