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Genome-Wide Identification, Characterization, and Expression Profiling of the Legume BZR Transcription Factor Gene Family
Li, Yueying; He, Liangliang; Li, Jing; Chen, Jianghua; Liu, Changning
2018
Source PublicationFRONTIERS IN PLANT SCIENCE
ISSN1664-462X
Volume9Issue:xPages:-
Abstract

The BRASSINAZOLE-RESISTANT (BZR) family of transcription factors (TFs) are positive regulators in the biosynthesis of brassinosteroids. The latter is a class of steroid hormones that affect a variety of developmental and physiological processes in plants. BZR TFs play essential roles in the regulation of plant growth and development, including multiple stress-resistance functions. However, the evolutionary history and individual expression patterns of the legume BZR genes has not been determined. In this study, we performed a genome-wide investigation of the BZR gene family in seven legume species. In total, 52 BZR genes were identified and characterized. By analyzing their phylogeny, we divided these BZR genes into five groups by comparison with orthologs/paralogs in Arabidopsis thaliana. The intron/exon structural patterns and conserved protein motifs of each gene were analyzed and showed high group-specificities. Legume BZR genes were unevenly distributed among their corresponding genomes. Genome and gene sequence comparisons revealed that gene expansion of the BZR TF family in legumes mainly resulted from segmental duplications and that this family has undergone purifying selection. Synteny analysis showed that BZR genes tended to localize within syntenic blocks conserved across legume genomes. The expression patterns of BZR genes among various legume vegetative tissues and in response to different abiotic stresses were analyzed using a combination of public transcriptome data and quantitative PCR. The patterns indicated that many BZR genes regulate legume organ development and differentiation, and significantly respond to drought and salt stresses. This study may provide valuable information for understanding the evolution of BZR gene structure and expression, and lays a foundation for future functional analysis of the legume BZR genes by species and by gene.

Departmentxtbg-ir
KeywordGenome-wide Analysis Expression Profiling Legume Bzr Transcription Factor Abiotic Stresses
Subject AreaPlant Sciences
DOI10.3389/fpls.2018.01332
Indexed BySCI
Language英语
WOS IDWOS:000444982700001
Citation statistics
Document Type期刊论文
Identifierhttps://ir.xtbg.ac.cn/handle/353005/11094
Collection2012年后新成立研究组
Corresponding AuthorLiu, Changning
AffiliationChinese Acad Sci, Xishuangbanna Trop Bot Garden, Key Lab Trop Plant Resources & Sustainable Use, Menglun, Mengla County, Peoples R China
Recommended Citation
GB/T 7714
Li, Yueying,He, Liangliang,Li, Jing,et al. Genome-Wide Identification, Characterization, and Expression Profiling of the Legume BZR Transcription Factor Gene Family[J]. FRONTIERS IN PLANT SCIENCE,2018,9(x):-.
APA Li, Yueying,He, Liangliang,Li, Jing,Chen, Jianghua,&Liu, Changning.(2018).Genome-Wide Identification, Characterization, and Expression Profiling of the Legume BZR Transcription Factor Gene Family.FRONTIERS IN PLANT SCIENCE,9(x),-.
MLA Li, Yueying,et al."Genome-Wide Identification, Characterization, and Expression Profiling of the Legume BZR Transcription Factor Gene Family".FRONTIERS IN PLANT SCIENCE 9.x(2018):-.
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